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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885407.1_cds_XP_016439382.1_34941
CDS Infomation

[gene=LOC107765272] [db_xref=GeneID:107765272] [protein=putative E3 ubiquitin-protein ligase XBAT35 isoform X1] [protein_id=XP_016439382.1] [location=join(94587..94688,95468..95582,97017..97097,97193..97281,97396..97487,97815..97896,98380..98482,98573..98647,99792..99877,100079..100762)] [gbkey=CDS]
Sequence

ATGGGGCAGCAGCAATCGAAAGACGAGCTTCTGTATCAGCAAGTAAATTATGGAAATATC
GAAGGCATCAAATCTCTTCACCGTGAAGGCGCTGCCCTTGAGTGGATGGATAAGGAAGGG
AAGACGCCGTTGATTGTGGCATGCATGAATCCTGAGCTTTACAATGTCGCAAAAACTTTG
ATAGAATTGGGTGCCAATGTCAATGCTTACCGTCCAGGTCGTCATGCGGGGACTCCTCTA
CATCTTGCAGCAAAAAGAGGTCTTGAGCAGACGGTGAAGTTACTCCTTTCACATGGAGCA
AATGCATTGATAATGAATGATGACTGCCAAACGCCACTTGATGTTGCCAGAATTAAAGGT
TTCAGCAATGTTGTCCGTGCAATTGAGAACCATATTTGCTTATTTTCTGGTTGGCTACGA
GAACTTTACGGGCCTGGATTTCTTGAACTGTTCGCACCACAGTTGCTTAGCCGGAAAGTC
TGGGTGGTTGTCTTACCATGCGGTTCCCGTAATCTCAGAAAGCCTTTCAAGTTGGAGCTT
GCTATATATTCAGCTGTCCAGGATGCTCAGCCCCGCACAATAGTTGCACTGTGGAAGGCC
AATATGGAAGAACCAAATTTCAGCCTGCCTGATCCAGCAGTTATCATATCCGATATTTCA
AACATCCCGAGGCGCTGGAGGCGAAGGCGAGGGATAATGCCCTCCCAAGGGATAAGGAAT
AGACCCCGAGGAGCTAGGCAAACAAGGATTAAACTAACATCTGTCCAGGAAAGCGAAAAG
CAGCAATTGCAGTCTTTCTGCAATGCATGCAAGGGAATTCCTCAGGTCATGCATCCAGCA
TTTCCTTTCAGATCTCAAACTCCTGTGGTCCCTGCAACTGCTCCTTCGACCACAGAGGAT
GTTGAATTAGCAATGGCGATTAGTGCCTCTCTTCAGTCCGCTTCACAGCAAAGACCAACC
TATCATGAGAATCACCTAGGATCAGGAACAGAAACATCAATGAATTGGATTAACCCTGTT
GAGGTTGCCAGTCATAGTGATAGCTCTTTGACAGGGGCTTCTTCCCAAAAAGCTAGTAGT
AGTGTCTGCCAGGTTGAGGAAGCCAGTTCAAGTGGCACTCAAGTTGAGCAAGTCCACACT
TCTAGTGATACATCTACTGTTGTTGAAGCAATACAAGAGAATCCGGTTACTGAATCTGTC
CCAACAGCTCCTCCTCTTACGGATGAAGTTATAGACAATGGGCCAATTCACTATCCATTG
ATCGACGCCAGCCCAGTTGACTTGGCTTCTCCGACTATTGAGAACTCTGGGGCACAAGAA
AGCAGTAATCCTGATGGTGCTTCTTCATCTTGTGTAATATGCTTAGATGCTCCCGTGGAA
GGAGCTTGCATCCCTTGTGGCCACATGGCTGGATGCATGTCTTGTTTGAATGAGATCAAG
GGAAAGAAGTGGGGCTGCCCCGTCTGTCGTGCCAAGATAGATCAGGTGATAAGGTTGTAT
GCTGTTTAA

Peptide Sequence

PEP ID

XP_016439382.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 isoform X1 [Nicotiana tabacum]
Sequence

MGQQQSKDELLYQQVNYGNIEGIKSLHREGAALEWMDKEGKTPLIVACMNPELYNVAKTL
IELGANVNAYRPGRHAGTPLHLAAKRGLEQTVKLLLSHGANALIMNDDCQTPLDVARIKG
FSNVVRAIENHICLFSGWLRELYGPGFLELFAPQLLSRKVWVVVLPCGSRNLRKPFKLEL
AIYSAVQDAQPRTIVALWKANMEEPNFSLPDPAVIISDISNIPRRWRRRRGIMPSQGIRN
RPRGARQTRIKLTSVQESEKQQLQSFCNACKGIPQVMHPAFPFRSQTPVVPATAPSTTED
VELAMAISASLQSASQQRPTYHENHLGSGTETSMNWINPVEVASHSDSSLTGASSQKASS
SVCQVEEASSSGTQVEQVHTSSDTSTVVEAIQENPVTESVPTAPPLTDEVIDNGPIHYPL
IDASPVDLASPTIENSGAQESSNPDGASSSCVICLDAPVEGACIPCGHMAGCMSCLNEIK
GKKWGCPVCRAKIDQVIRLYAV

Transcript Sequence

Gene sequence data has not been registered.